species:   Artha
pid:       MI0000982
parent:    ath-MIR169h
paralog:   
locus:     1:6695420-6695609
matures:   ['UAGCCAAGGAUGACUUGCCUG', 'GGCAGUCUCCUUGGCUAUUC']
srr:       SRR9216053
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216053.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216053.cram 1:6695420-6695609

0 out of bounds
3 alignments
2 proper strand
2 stranded perfect matches

                                            **********************                                                             *********************                                          
UCAUAUAAGAGAAAAUGGUGACAUGAAGAAUGAGAACUUGUGUGGUAGCCAAGGAUGACUUGCCUGCGUUUUAGACCAUAUAUAUCAAAGACUCACUCGAUCGAUAGUCUUAGAGUUGGUUGGUCGUCAGGCAGUCUCCUUGGCUAUUCAAACAAUUCUCAUUCUCUUCAUUCACAUUUCUCUUUUUUGG
.((...((((((((...((((.((((((((((((((.((((.(((((((((((((.((((.(((((.......(((((..((..((.((((((...((....)).)))))).))..))..)))))..))))))))))))))))))).))).)))))))))))..))))))))))).))))))))...)).
---------------------------------------------UAGCCAAGGAUGACUUGCCUG---------------------------------------------------------------------------------------------------------------------------- l=21 a=0 c
---------------------------------------------------------------------------------------------------------------------------------GGCAGUCUCCUUGGCUAUUC----------------------------------------- l=20 a=0 c*
---------------------------------------------------------------------------------------------------------------------------------GGCAGUCUCCUUGGCUAUU------------------------------------------ l=19 a=2 ma
----------------------------------------------AGCCAAGGAUGACUUGCCUG---------------------------------------------------------------------------------------------------------------------------- l=20 a=0 ma*

---------------------------------------------------------------------------------------------------------------------------------GGCAGUCUCCUUGGCUAUU------------------------------------------ l=19 a=2 (ma)

mb-01011
ax-1011001
ku-01
ss-101010111110
fn-001
